Please use this identifier to cite or link to this item: http://repositorio.unicamp.br/jspui/handle/REPOSIP/34350
Type: Artigo de periódico
Title: Identification of citrus expressed sequence tags (ESTs) encoding pleiotropic drug resistance (PDR)-like proteins
Author: Amaral, Alexandre Morais do
Saito, Daniel
Formighieri, Eduardo Fernandes
Rabello, Edenilson
Souza, Adriane N. de
Silva-Stenico, Maria Estela
Tsai, Siu Mui
Abstract: Pleiotropic drug resistance (PDR) proteins, a subfamily of the ATP-binding cassette (ABC) transporters, have been recently shown to play a role in plant defense against biotic and abiotic stresses. However, nothing is known about their expression in citrus. To investigate the occurrence of PDR homologues in citrus species, we have surveyed EST sequences from different tissues and conditions of the Citrus Expressed Sequence Tags (CitEST) database, through sequence similarity search analyses and inspections for characteristic PDR domains. Multiple sequence alignments, prediction of transmembrane topology and phylogenetic analysis of PDR-like proteins were additionally performed. This study allowed the identification of nine putative proteins showing characteristic PDR features in citrus species under various conditions, which may indicate a potential correlation between PDRs and stress and metabolism of citrus plants. Moreover, a tissue-specific putative PDR-like protein was found in sweet orange fruits. To our knowledge, this is the first report regarding the identification of citrus ESTs encoding PDR-like proteins as well as the first to identify a putative full ABC transporter with specific expression in fruits.
Subject: ABC transporters
CitEST
expressed sequence tag
transcriptome
stress
Editor: Sociedade Brasileira de Genética
Rights: aberto
Identifier DOI: 10.1590/S1415-47572007000500014
Address: http://dx.doi.org/10.1590/S1415-47572007000500014
http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000500014
Date Issue: 1-Jan-2007
Appears in Collections:Artigos e Materiais de Revistas Científicas - Unicamp

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