Please use this identifier to cite or link to this item: http://repositorio.unicamp.br/jspui/handle/REPOSIP/197059
Type: Artigo de periódico
Title: Identification Of Bacteria In Endodontic Infections By Sequence Analysis Of 16s Rdna Clone Libraries.
Author: Saito, Daniel
Leonardo, Renato de Toledo
Rodrigues, Jorge Luiz Mazza
Tsai, Siu Mui
Höfling, José Francisco
Gonçalves, Reginaldo Bruno
Abstract: A significant proportion of oral bacteria are unable to undergo cultivation by existing techniques. In this regard, the microbiota from root canals still requires complementary characterization. The present study aimed at the identification of bacteria by sequence analysis of 16S rDNA clone libraries from seven endodontically infected teeth. Samples were collected from the root canals, subjected to the PCR with universal 16S rDNA primers, cloned and partially sequenced. Clones were clustered into groups of closely related sequences (phylotypes) and identification to the species level was performed by comparative analysis with the GenBank, EMBL and DDBJ databases, according to a 98% minimum identity. All samples were positive for bacteria and the number of phylotypes detected per subject varied from two to 14. The majority of taxa (65.2%) belonged to the phylum Firmicutes of the Gram-positive bacteria, followed by Proteobacteria (10.9%), Spirochaetes (4.3%), Bacteroidetes (6.5%), Actinobacteria (2.2%) and Deferribacteres (2.2%). A total of 46 distinct taxonomic units was identified. Four clones with low similarity to sequences previously deposited in the databases were sequenced to nearly full extent and were classified taxonomically as novel representatives of the order Clostridiales, including a putative novel species of Mogibacterium. The identification of novel phylotypes associated with endodontic infections suggests that the endodontium may still harbour a relevant proportion of uncharacterized taxa.
Subject: Adolescent
Adult
Bacterial Infections
Cloning, Molecular
Dna, Bacterial
Dna, Ribosomal
Dental Pulp Cavity
Female
Gene Library
Gram-negative Bacteria
Gram-positive Bacteria
Humans
Male
Molecular Sequence Data
Polymerase Chain Reaction
Pulpitis
Rna, Ribosomal, 16s
Sequence Analysis, Dna
Rights: fechado
Identifier DOI: 10.1099/jmm.0.46212-0
Address: http://www.ncbi.nlm.nih.gov/pubmed/16388037
Date Issue: 2006
Appears in Collections:Unicamp - Artigos e Outros Documentos

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