Please use this identifier to cite or link to this item: http://repositorio.unicamp.br/jspui/handle/REPOSIP/195481
Type: Artigo de periódico
Title: Rna Expression Profiles And Data Mining Of Sugarcane Response To Low Temperature.
Author: Nogueira, Fábio T S
De Rosa, Vicente E
Menossi, Marcelo
Ulian, Eugênio C
Arruda, Paulo
Abstract: Tropical and subtropical plants are generally sensitive to cold and can show appreciable variation in their response to cold stress when exposed to low positive temperatures. Using nylon filter arrays, we analyzed the expression profile of 1,536 expressed sequence tags (ESTs) of sugarcane (Saccharum sp. cv SP80-3280) exposed to cold for 3 to 48 h. Thirty-four cold-inducible ESTs were identified, of which 20 were novel cold-responsive genes that had not previously been reported as being cold inducible, including cellulose synthase, ABI3-interacting protein 2, a negative transcription regulator, phosphate transporter, and others, as well as several unknown genes. In addition, 25 ESTs were identified as being down-regulated during cold exposure. Using a database of cold-regulated proteins reported for other plants, we searched for homologs in the sugarcane EST project database (SUCEST), which contains 263,000 ESTs. Thirty-three homologous putative cold-regulated proteins were identified in the SUCEST database. On the basis of the expression profiles of the cold-inducible genes and the data-mining results, we propose a molecular model for the sugarcane response to low temperature.
Subject: Cold Temperature
Down-regulation
Expressed Sequence Tags
Gene Expression Profiling
Gene Expression Regulation, Plant
Molecular Sequence Data
Oligonucleotide Array Sequence Analysis
Rna, Plant
Saccharum
Up-regulation
Rights: fechado
Identifier DOI: 
Address: http://www.ncbi.nlm.nih.gov/pubmed/12913139
Date Issue: 2003
Appears in Collections:Unicamp - Artigos e Outros Documentos

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