Please use this identifier to cite or link to this item: http://repositorio.unicamp.br/jspui/handle/REPOSIP/1211
Type: Artigo de periódico
Title: Genetic diversity in cultivated carioca common beans based on molecular marker analysis
Author: PERSEGUINI, Juliana Morini Küpper Cardoso
CHIORATTO, Alisson Fernando
ZUCCHI, Maria Imaculada
COLOMBO, Carlos Augusto
CARBONELL, Sérgio Augusto Moraes
MONDEGO, Jorge Mauricio Costa
GAZAFFI, Rodrigo
GARCIA, Antonio Augusto Franco
CAMPOS, Tatiana de
SOUZA, Anete Pereira de
RUBIANO, Luciana Benchimol
Abstract: A wide array of molecular markers has been used to investigate the genetic diversity among common bean species. However, the best combination of markers for studying such diversity among common bean cultivars has yet to be determined. Few reports have examined the genetic diversity of the carioca bean, commercially one of the most important common beans in Brazil. In this study, we examined the usefulness of two molecular marker systems (simple sequence repeats - SSRs and amplified fragment length polymorphisms - AFLPs) for assessing the genetic diversity of carioca beans. The amount of information provided by Roger's modified genetic distance was used to analyze SSR data and Jaccards similarity coefficient was used for AFLP data. Seventy SSRs were polymorphic and 20 AFLP primer combinations produced 635 polymorphic bands. Molecular analysis showed that carioca genotypes were quite diverse. AFLPs revealed greater genetic differentiation and variation within the carioca genotypes (Gst = 98% and Fst = 0.83, respectively) than SSRs and provided better resolution for clustering the carioca genotypes. SSRs and AFLPs were both suitable for assessing the genetic diversity of Brazilian carioca genotypes since the number of markers used in each system provided a low coefficient of variation. However, fingerprint profiles were generated faster with AFLPs, making them a better choice for assessing genetic diversity in the carioca germplasm.
Subject: AFLPs
Genetic structure
Genetic variability
Phaseolus vulgaris L.
SSRs
Country: Brasil
Editor: Sociedade Brasileira de Genética
Citation: Genetics and Molecular Biology, v.34, n.1, p.88-102, 2011
Rights: aberto
Identifier DOI: 10.1590/S1415-47572011000100017
Address: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572011000100017
http://www.scielo.br/pdf/gmb/v34n1/17.pdf
Date Issue: 2011
Appears in Collections:CBMEG - Artigos e Outros Documentos

Files in This Item:
File Description SizeFormat 
art_GAZAFFI_Genetic_diversity_in_cultivated_carioca_common_beans_2011.pdfpublished version388.57 kBAdobe PDFView/Open


Items in DSpace are protected by copyright, with all rights reserved, unless otherwise indicated.