Please use this identifier to cite or link to this item: http://repositorio.unicamp.br/jspui/handle/REPOSIP/244094
Type: Artigo de periódico
Title: First Insights On The Retroelement Rex1 In The Cytogenetics Of Frogs
Author: Nascimento
Juliana; Baldo
Diego; Lourenco
Luciana Bolsoni
Abstract: Background: While some transposable elements (TEs) have been found in the sequenced genomes of frog species, detailed studies of these elements have been lacking. In this work, we investigated the occurrence of the Rex1 element, which is widespread in fish, in anurans of the genus Physalaemus. We isolated and characterized the reverse transcriptase (RT)-coding sequences of Rex1 elements of five species of this genus. Results: The amino acid sequences deduced from the nucleotide sequences of the isolated fragments allowed us to unambiguously identify regions corresponding to domains 3-7 of RT. Some of the nucleotide sequences isolated from Physlaemus ephippifer and P. albonotatus had internal deletions, suggesting that these fragments are likely not active TEs, despite being derived from a Rex1 element. When hybridized with metaphase chromosomes, Rex1 probes were revealed at the pericentromeric heterochromatic region of the short arm of chromosome 3 of the P. ephippifer karyotype. Neither other heterochromatin sites of the P. ephippifer karyotype nor any chromosomal regions of the karyotypes of P. albonotatus, P. spiniger and P. albifrons were detected with these probes. Conclusions: Rex1 elements were found in the genomes of five species of Physalaemus but clustered in only the P. ephippifer karyotype, in contrast to observations in some species of fish, where large chromosomal sites with Rex1 elements are typically present.
Subject: Non-ltr Retrotransposon
Transposable Elements
Chromosomal Localization
Tetraodon-nigroviridis
Ribosomal Dna
Cichlid Fish
Group Anura
5s Rdna
Genome
Evolution
Country: LONDON
Editor: BIOMED CENTRAL LTD
Citation: First Insights On The Retroelement Rex1 In The Cytogenetics Of Frogs. Biomed Central Ltd, v. 8, p. Nov-2015.
Rights: aberto
Identifier DOI: 10.1186/s13039-015-0189-5
Address: http://molecularcytogenetics.biomedcentral.com/articles/10.1186/s13039-015-0189-5
Date Issue: 2015
Appears in Collections:Unicamp - Artigos e Outros Documentos

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