Browsing by Author Martínez, Leandro

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PreviewIssue DateTitleAuthor(s)AdvisorType
2005Molecular Dynamics Simulations Reveal Multiple Pathways Of Ligand Dissociation From Thyroid Hormone Receptors.Martínez, Leandro; Sonoda, Milton T; Webb, Paul; Baxter, John D; Skaf, Munir S; Polikarpov, Igor-Artigo de periódico
2009Gaining Ligand Selectivity In Thyroid Hormone Receptors Via Entropy.Martínez, Leandro; Nascimento, Alessandro S; Nunes, Fabio M; Phillips, Kevin; Aparicio, Ricardo; Dias, Sandra Martha G; Figueira, Ana Carolina M; Lin, Jean H; Nguyen, Phuong; Apriletti, James W; Neves, Francisco A R; Baxter, John D; Webb, Paul; Skaf, Munir S; Polikarpov, Igor-Artigo de periódico
2008Only Subtle Protein Conformational Adaptations Are Required For Ligand Binding To Thyroid Hormone Receptors: Simulations Using A Novel Multipoint Steered Molecular Dynamics Approach.Martínez, Leandro; Polikarpov, Igor; Skaf, Munir S-Artigo de periódico
2004Globally Convergent Trust-region Methods For Self-consistent Field Electronic Structure Calculations.Francisco, Juliano B; Martínez, José Mario; Martínez, Leandro-Artigo de periódico
2011Molecular Characterization Of A Miraculin-like Gene Differentially Expressed During Coffee Development And Coffee Leaf Miner Infestation.Mondego, Jorge Maurício Costa; Duarte, Melina Pasini; Kiyota, Eduardo; Martínez, Leandro; de Camargo, Sandra Rodrigues; De Caroli, Fernanda P; Alves, Beatriz Santos Capela; Guerreiro, Sandra Maria Carmello; Oliva, Maria Luiza Vilela; Guerreiro-Filho, Oliveiro; Menossi, Marcelo-Artigo de periódico
2003Packing Optimization For Automated Generation Of Complex System's Initial Configurations For Molecular Dynamics And Docking.Martínez, José Mario; Martínez, Leandro-Artigo de periódico
2006Molecular Dynamics Simulations Of Ligand Dissociation From Thyroid Hormone Receptors: Evidence Of The Likeliest Escape Pathway And Its Implications For The Design Of Novel Ligands.Martínez, Leandro; Webb, Paul; Polikarpov, Igor; Skaf, Munir S-Artigo de periódico
2010On The Denaturation Mechanisms Of The Ligand Binding Domain Of Thyroid Hormone Receptors.Martínez, Leandro; Souza, Paulo C T; Garcia, Wanius; Batista, Fernanda A H; Portugal, Rodrigo V; Nascimento, Alessandro S; Nakahira, Marcel; Lima, Luis M T R; Polikarpov, Igor; Skaf, Munir S-Artigo de periódico
1-Mar-2004A review on the dynamics of waterSonoda, Milton T.; Moreira, Ney H.; Martínez, Leandro; Favero, Frank W.; Vechi, Sérgio M.; Martins, Lucimara R.; Skaf, Munir S.-Artigo de periódico
2015Automatic Identification Of Mobile And Rigid Substructures In Molecular Dynamics Simulations And Fractional Structural Fluctuation Analysis.Martínez, Leandro-Artigo de periódico
Sep-2019Coevolutionary signals and structure-based models for the prediction of protein native conformationsSantos, Ricardo Nascimento dos; Jiang, Xianli; Martínez, Leandro; Morcos, Faruck-Outro documento
2012Medium chain fatty acids are selective peroxisome proliferator activated receptor (PPAR) γ activators and Pan-PPAR partial agonistsLiberato, Marcelo Vizoná; Nascimento, Alessandro S.; Ayers, Steven D.; Lin, Jean Z.; Cvoro, Aleksandra; Silveira, Rodrigo L.; Martínez, Leandro; Souza, Paulo C. T.; Saidemberg, Daniel; Tuo Deng; Amato, Angela Angelica; Togashi, Marie; Hsueh, Willa A.; Phillips, Kevin; Palma, Mário Sérgio; Neves, Francisco A. R.; Skaf, Munir S.; Webb, Paul; Polikarpov, Igor-Artigo
2012Enzyme microheterogeneous hydration and stabilization in supercritical carbon dioxideSilveira, Rodrigo L.; Martínez, Julian; Skaf, Munir S.; Martínez, Leandro-Artigo
2012Hb S-São Paulo : a new sickling hemoglobin with stable polymers and decreased oxygen affinityJorge, Susan E.D.C.; Petruk, Ariel A.; Kimura, Elza M.; Oliveira, Denise M.; Caire, Lucas; Suemasu, Cintia N.; Silveira, Paulo A.A.; Albuquerque, Dulcineia M.; Costa, Fernando F.; Skaf, Munir S.; Martínez, Leandro; Sonati, Maria de Fatima-Artigo
2008Only subtle protein conformational adaptations are required for ligand binding to thyroid hormone receptors: simulations using a novel multipoint steered molecular dynamics approachMartínez, Leandro; Polikarpov, Igor; Skaf, Munir S.-Artigo
2010Structural modeling of high-affinity thyroid receptor-ligand complexesAraujo, Alexandre Suman de; Martínez, Leandro; Nicoluci, Ricardo de Paula; Skaf, Munir S.; Polikarpov, Igor-Artigo
2011Molecular basis of the thermostability and thermophilicity of laminarinases: x-ray structure of the hyperthermostable laminarinase from rhodothermus marinus and molecular dynamics simulationsBleicher, Lucas; Prates, Erica T.; Gomes, Thiago C. F.; Silveira, Rodrigo L.; Nascimento, Alessandro S.; Rojas, Adriana L.; Golubev, Alexander; Martínez, Leandro; Skaf, Munir S.; Polikarpov, Igor-Artigo
2009Gaining ligand selectivity in thyroid hormone receptors via entropyMartínez, Leandro; Nascimento, Alessandro S.; Nunes, Fabio M.; Phillips, Kevin; Aparicio, Ricardo; Dias, Sandra Martha G.; Figueira, Ana Carolina M.; Lin, Jean H.; Nguyen, Phuong; Apriletti, James W.; Neves, Francisco A. R.; Baxter, John D.; Webb, Paul; Skaf, Munir S.; Polikarpov, Igor-Artigo
2009On the denaturation mechanisms of the ligand binding domain of thyroid hormone receptorsMartínez, Leandro; Souza, Paulo C. T.; Garcia, Wanius; Batista, Fernanda A. H.; Portugal, Rodrigo V.; Nascimento, Alessandro S.; Nakahira, Marcel; Lima, Luis M. T. R.; Polikarpov, Igor; Skaf, Munir S.-Artigo
2011Mapping the intramolecular vibrational energy flow in proteins reveals functionally important residuesMartínez, Leandro; Figueira, Ana C. M.; Webb, Paul; Polikarpov, Igor; Skaf, Munir S.-Outro documento